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Continuous Integration

Continuous Integration (CI) allows to automatically run processes on the code each time a commit is pushed. For example it can be used to run the tests, build the documentation, build a package or maintain dependencies updated.

I've automated the configuration of CI/CD pipelines for python projects in this cookiecutter template.

There are three non exclusive ways to run the tests:

  • Integrate them in your editor, so it's executed each time you save the file.
  • Through a pre-commit hook to make it easy for the collaborator to submit correctly formatted code. pre-commit is a framework for managing and maintaining multi-language pre-commit hooks.
  • Through a CI server (like Drone or Github Actions) to ensure that the commited code meets the quality standards. Developers can bypass the pre-commit filter, so we need to set up the quality gate in an agnostic environment.

Depending on the time the test takes to run and their different implementations, we'll choose from one to three of the choices above.

Configuring pre-commit

To adopt pre-commit to our system we have to:

  • Install pre-commit: pip3 install pre-commit and add it to the development requirements.txt.
  • Define .pre-commit-config.yaml with the hooks you want to include (they don't plan to support pyproject.toml).
  • Execute pre-commit install to install git hooks in your .git/ directory.
  • Execute pre-commit run --all-files to tests all the files. Usually pre-commit will only run on the changed files during git hooks.

Static analysis checkers

Static analysis is the analysis of computer software that is performed without actually executing programs.


Formatters are tools that change your files to meet a linter requirements.

  • Black: A python style guide formatter tool.


Lint, or a linter, is a static code analysis tool used to flag programming errors, bugs, stylistic errors, and suspicious constructs. The term originates from a Unix utility that examined C language source code.

  • alex to find gender favoring, polarizing, race related, religion inconsiderate, or other unequal phrasing in text.
  • Flake8: A python style guide checker tool.
  • markdownlint: A linter for Markdown files.
  • proselint: Is another linter for prose.
  • Yamllint: A linter for YAML files.
  • write-good is a naive linter for English prose.

Type checkers

Type checkers are programs that the code is compliant with a defined type system which is a logical system comprising a set of rules that assigns a property called a type to the various constructs of a computer program, such as variables, expressions, functions or modules. The main purpose of a type system is to reduce possibilities for bugs by defining interfaces between different parts of the program, and then checking that the parts have been connected in a consistent way.

  • Mypy: A static type checker for Python.

Security vulnerability checkers

Tools that check potential vulnerabilities in the code.

  • Bandit: Finds common security issues in Python code.
  • Safety: Checks your installed dependencies for known security vulnerabilities.

Other pre-commit tests

Pre-commit comes with several tests by default. These are the ones I've chosen.

File: .pre-commit-config.yaml

- repo:
  rev: v3.1.0
    - id: trailing-whitespace
    - id: check-added-large-files
    - id: check-docstring-first
    - id: check-merge-conflict
    - id: end-of-file-fixer
    - id: detect-private-key

Update package dependencies

Tools to automatically keep your dependencies updated.

Coverage reports

Coveralls is a service that monitors and writes statistics on the coverage of your repositories. To use them, you'll need to log in with your Github account and enable the repos you want to test.

Save the secret in the repository configuration and add this step to your tests job.

    - name: Coveralls
      uses: coverallsapp/github-action@master
        github-token: ${{ secrets.COVERALLS_TOKEN }}

Add the following badge to your

Variables to substitute:

  • repository_path: Github repository path, like lyz-code/pydo.
[![Coverage Status]({{ repository_path
}}/badge.svg?branch=master)]({{ repository_path }}?branch=master)


error: pathspec 'master' did not match any file(s) known to git

If you have this error while making a commit through a pipeline step, it may be the pre-commits stepping in.

To fix it, remove all git hooks with rm -r .git/hooks.

Last update: 2022-04-29